Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_16865 | Not Available | Negative | 3613327 - 3613527 | 7393.05 |
| flavin reductase family protein | DXA34_16870 | Not Available | Positive | 3613763 - 3614323 | 20047.8 |
| hypothetical protein | DXA34_16875 | Not Available | Positive | 3614416 - 3615057 | 24537.0 |
| marr family transcriptional regulator | DXA34_16885 | Not Available | Positive | 3615352 - 3615846 | 18889.7 |
| conjugal transfer protein | DXA34_16890 | Not Available | Positive | 3615843 - 3616031 | 7312.87 |
| cytidylate kinase-like family protein | DXA34_16895 | Not Available | Positive | 3616101 - 3616724 | 23610.3 |
| mate family efflux transporter | DXA34_16900 | Not Available | Positive | 3616721 - 3618046 | 47941.6 |
| gnat family n-acetyltransferase | DXA34_16905 | Not Available | Positive | 3618061 - 3618603 | 20914.1 |
| peptidylarginine deiminase | DXA34_16910 | Not Available | Positive | 3618659 - 3620053 | 53379.2 |
| sporulation integral membrane protein ytvi | DXA34_16915 | Not Available | Positive | 3620157 - 3621275 | 40942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
