Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | DXA34_01230 | Not Available | Negative | 242491 - 243912 | 50169.3 |
| hypothetical protein | DXA34_01235 | Not Available | Positive | 244307 - 244984 | 25048.1 |
| spermidine/putrescine abc transporter permease/substrate-binding protein potcd | DXA34_01240 | Not Available | Negative | 245132 - 247069 | 73166.6 |
| abc transporter permease | DXA34_01245 | Not Available | Negative | 247069 - 247890 | 30031.1 |
| abc transporter atp-binding protein | DXA34_01250 | Not Available | Negative | 247883 - 248959 | 39846.9 |
| helix-turn-helix domain-containing protein | DXA34_01255 | Not Available | Negative | 248984 - 249517 | 19855.5 |
| lactonase family protein | DXA34_01265 | Not Available | Positive | 250546 - 251652 | 40957.4 |
| chorismate synthase | DXA34_01270 | Not Available | Positive | 251810 - 252916 | 39591.5 |
| tigr01440 family protein | DXA34_01275 | Not Available | Positive | 253454 - 254050 | 21518.2 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DXA34_01280 | Not Available | Positive | 254150 - 255622 | 55154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
