Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_16495 | Not Available | Positive | 3535371 - 3535565 | 6926.2 |
| duf4368 domain-containing protein | DXA34_16500 | Not Available | Positive | 3535711 - 3537288 | 60867.2 |
| xre family transcriptional regulator | DXA34_16505 | Not Available | Positive | 3537338 - 3537778 | 16452.7 |
| duf2164 family protein | DXA34_16510 | Not Available | Positive | 3538385 - 3538618 | 9176.87 |
| srtb family sortase | DXA34_16515 | Not Available | Positive | 3538694 - 3539542 | 31955.5 |
| glucose-1-phosphate thymidylyltransferase | DXA34_16520 | Not Available | Positive | 3539779 - 3540672 | 33389.8 |
| dtdp-glucose 4,6-dehydratase | DXA34_16525 | Not Available | Positive | 3540709 - 3541731 | 39040.1 |
| dtdp-4-dehydrorhamnose reductase | DXA34_16530 | Not Available | Positive | 3541744 - 3542604 | 32433.5 |
| phosphoglucosamine mutase | DXA34_16535 | Not Available | Positive | 3542697 - 3544049 | 49554.0 |
| transcription elongation factor grea | DXA34_16540 | Not Available | Positive | 3544187 - 3544690 | 19158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
