Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_16380 | Not Available | Positive | 3517470 - 3518126 | 24948.6 |
| uracil-dna glycosylase | DXA34_16385 | Not Available | Positive | 3518238 - 3518912 | 25357.4 |
| undecaprenyl-diphosphate phosphatase | DXA34_16390 | Not Available | Positive | 3518941 - 3519780 | 30906.0 |
| polysaccharide deacetylase | DXA34_16395 | Not Available | Positive | 3520050 - 3520844 | 29375.0 |
| replication-associated recombination protein a | DXA34_16400 | Not Available | Positive | 3520860 - 3522182 | 48564.1 |
| 50s ribosomal protein l31 | DXA34_16410 | Not Available | Positive | 3524515 - 3524724 | 7717.16 |
| duf1385 domain-containing protein | DXA34_16415 | Not Available | Positive | 3524880 - 3525821 | 35630.2 |
| peptide chain release factor n(5)-glutamine methyltransferase | DXA34_16420 | Not Available | Positive | 3525818 - 3526882 | 39814.3 |
| peptide chain release factor 1 | DXA34_16425 | Not Available | Positive | 3526938 - 3528011 | 40720.3 |
| mmcq/yjbr family dna-binding protein | DXA34_16430 | Not Available | Positive | 3528209 - 3528604 | 15775.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
