Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | DXA34_16170 | Not Available | Negative | 3472603 - 3474147 | 57831.4 |
| regulatory protein recx | DXA34_16175 | Not Available | Negative | 3474285 - 3474902 | 24153.7 |
| recombinase reca | DXA34_16180 | Not Available | Negative | 3474941 - 3476035 | 39049.0 |
| trk family potassium uptake protein | DXA34_16185 | Not Available | Positive | 3476400 - 3477746 | 48772.9 |
| trka family potassium uptake protein | DXA34_16190 | Not Available | Positive | 3477774 - 3478418 | 24081.1 |
| dihydroorotate dehydrogenase | DXA34_16195 | Not Available | Positive | 3478590 - 3479213 | 23345.0 |
| mbl fold metallo-hydrolase | DXA34_16200 | Not Available | Negative | 3479210 - 3480043 | 31134.0 |
| hypothetical protein | DXA34_16210 | Not Available | Negative | 3480670 - 3480978 | 11928.5 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DXA34_16215 | Not Available | Negative | 3480994 - 3482280 | 47269.3 |
| folate family ecf transporter s component | DXA34_16220 | Not Available | Negative | 3482277 - 3482834 | 19890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
