Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | DXA34_16115 | Not Available | Negative | 3460250 - 3463264 | 108156.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXA34_16120 | Not Available | Negative | 3463283 - 3464467 | 41407.9 |
| dna-binding response regulator | DXA34_16125 | Not Available | Positive | 3464727 - 3465404 | 25854.5 |
| sensor histidine kinase | DXA34_16130 | Not Available | Positive | 3465401 - 3466477 | 40780.0 |
| tyrosine recombinase | DXA34_16135 | Not Available | Negative | 3466626 - 3467474 | 31710.6 |
| hypothetical protein | DXA34_16140 | Not Available | Negative | 3467735 - 3468280 | 19616.7 |
| nudix hydrolase | DXA34_16145 | Not Available | Negative | 3468380 - 3468979 | 22746.8 |
| pyrroline-5-carboxylate reductase | DXA34_16150 | Not Available | Negative | 3469056 - 3469853 | 28242.3 |
| hypothetical protein | DXA34_16155 | Not Available | Negative | 3469878 - 3470816 | 34887.2 |
| 4fe-4s dicluster domain-containing protein | DXA34_16165 | Not Available | Negative | 3471653 - 3472444 | 29482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
