Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_15950 | Not Available | Positive | 3415686 - 3418037 | 89384.6 |
| zinc ribbon domain-containing protein | DXA34_15955 | Not Available | Positive | 3418136 - 3418606 | 17138.0 |
| small multi-drug export protein | DXA34_15960 | Not Available | Positive | 3418615 - 3419121 | 18419.8 |
| sensor histidine kinase | DXA34_15965 | Not Available | Negative | 3419511 - 3421229 | 65119.8 |
| dna-binding response regulator | DXA34_15970 | Not Available | Negative | 3421201 - 3421941 | 28510.8 |
| hypothetical protein | DXA34_15975 | Not Available | Negative | 3421968 - 3422171 | 7473.38 |
| atp-dependent rna helicase dbpa | DXA34_15980 | Not Available | Negative | 3422550 - 3424208 | 62135.5 |
| amidohydrolase | DXA34_15985 | Not Available | Positive | 3424502 - 3425308 | 30637.3 |
| hypothetical protein | DXA34_15990 | Not Available | Negative | 3425315 - 3427021 | 63580.2 |
| carbohydrate kinase | DXA34_16000 | Not Available | Negative | 3427769 - 3428728 | 35121.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
