Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DXA34_15900 | Not Available | Positive | 3405030 - 3405836 | 31313.2 |
| rna polymerase sporulation sigma factor sigk | DXA34_15905 | Not Available | Positive | 3406050 - 3406679 | 23986.9 |
| udp-glucose 4-epimerase gale | DXA34_15910 | Not Available | Positive | 3406930 - 3407946 | 37018.1 |
| sodium:proton antiporter | DXA34_15915 | Not Available | Positive | 3408467 - 3409873 | 51351.4 |
| cytidylate kinase-like family protein | DXA34_15920 | Not Available | Positive | 3409889 - 3410920 | 39755.6 |
| putative dna modification/repair radical sam protein | DXA34_15925 | Not Available | Positive | 3411283 - 3412857 | 58360.7 |
| dna metabolism protein | DXA34_15930 | Not Available | Positive | 3412859 - 3413614 | 29964.1 |
| hypothetical protein | DXA34_15935 | Not Available | Positive | 3413824 - 3414132 | 10343.5 |
| gntr family transcriptional regulator | DXA34_15940 | Not Available | Positive | 3414283 - 3414819 | 20014.9 |
| abc transporter atp-binding protein | DXA34_15945 | Not Available | Positive | 3414812 - 3415711 | 34085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
