Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | DXA34_01120 | Not Available | Positive | 222930 - 223961 | 37607.0 |
| trap transporter small permease | DXA34_01125 | Not Available | Positive | 224056 - 224541 | 18470.1 |
| trap transporter large permease | DXA34_01130 | Not Available | Positive | 224538 - 225839 | 45838.8 |
| rraa family protein | DXA34_01135 | Not Available | Positive | 225952 - 226614 | 23546.5 |
| hypothetical protein | DXA34_01140 | Not Available | Positive | 226651 - 227481 | 31079.0 |
| ethanolamine utilization protein euta | DXA34_01150 | Not Available | Positive | 228566 - 230005 | 51797.7 |
| ethanolamine ammonia-lyase subunit eutb | DXA34_01155 | Not Available | Positive | 230074 - 231447 | 50389.4 |
| ethanolamine ammonia-lyase subunit eutc | DXA34_01160 | Not Available | Positive | 231452 - 232501 | 37240.6 |
| microcompartment protein eutl | DXA34_01165 | Not Available | Positive | 232558 - 233211 | 22684.7 |
| acetaldehyde dehydrogenase (acetylating) | DXA34_01170 | Not Available | Positive | 233222 - 234736 | 54060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
