Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXA34_15685 | Not Available | Positive | 3354418 - 3356283 | 68789.4 |
| xre family transcriptional regulator | DXA34_15690 | Not Available | Positive | 3356448 - 3356687 | 9146.2 |
| diaminopimelate dehydrogenase | DXA34_15695 | Not Available | Positive | 3356887 - 3357873 | 36390.2 |
| ybak/ebsc family protein | DXA34_15700 | Not Available | Positive | 3357939 - 3358406 | 17011.5 |
| xre family transcriptional regulator | DXA34_15705 | Not Available | Negative | 3358463 - 3358771 | 11702.0 |
| d-alanyl-d-alanine carboxypeptidase | DXA34_15710 | Not Available | Positive | 3359095 - 3360555 | 51439.1 |
| glycosyltransferase | DXA34_15715 | Not Available | Positive | 3360692 - 3361723 | 38283.1 |
| hypothetical protein | DXA34_15725 | Not Available | Positive | 3362403 - 3362594 | 7520.51 |
| hypothetical protein | DXA34_15730 | Not Available | Positive | 3362652 - 3363242 | 21385.4 |
| valine--trna ligase | DXA34_15735 | Not Available | Positive | 3363320 - 3365959 | 100919.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
