Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_15635 | Not Available | Negative | 3345251 - 3346876 | 64590.6 |
| hypothetical protein | DXA34_15640 | Not Available | Negative | 3346939 - 3347961 | 39814.0 |
| hypothetical protein | DXA34_15645 | Not Available | Negative | 3348037 - 3348270 | 8799.74 |
| pyrroline-5-carboxylate reductase | DXA34_15650 | Not Available | Positive | 3348324 - 3349115 | 27540.3 |
| duf2992 family protein | DXA34_15655 | Not Available | Negative | 3349444 - 3349860 | 16390.8 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DXA34_15660 | Not Available | Negative | 3350040 - 3350516 | 17752.8 |
| merr family transcriptional regulator | DXA34_15665 | Not Available | Negative | 3350641 - 3351459 | 30981.1 |
| duf3795 domain-containing protein | DXA34_15670 | Not Available | Negative | 3351452 - 3351718 | 9986.94 |
| padr family transcriptional regulator | DXA34_15675 | Not Available | Negative | 3351763 - 3352293 | 20623.1 |
| abc transporter atp-binding protein | DXA34_15680 | Not Available | Positive | 3352625 - 3354421 | 65633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
