Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | DXA34_15455 | Not Available | Positive | 3305183 - 3305422 | 9440.0 |
| duf3784 domain-containing protein | DXA34_15460 | Not Available | Positive | 3305429 - 3305740 | 11881.8 |
| magnesium-translocating p-type atpase | DXA34_15465 | Not Available | Positive | 3305902 - 3308667 | 101098.0 |
| hypothetical protein | DXA34_15470 | Not Available | Positive | 3308677 - 3308853 | 6732.59 |
| sigma-70 family rna polymerase sigma factor | DXA34_15475 | Not Available | Positive | 3308998 - 3309411 | 16095.3 |
| amidohydrolase | DXA34_15480 | Not Available | Positive | 3309988 - 3311175 | 43042.2 |
| hypothetical protein | DXA34_15485 | Not Available | Positive | 3311221 - 3311583 | 13740.4 |
| cupin domain-containing protein | DXA34_15500 | Not Available | Positive | 3312967 - 3313452 | 17915.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA34_15515 | Not Available | Positive | 3314387 - 3315412 | 37804.9 |
| atp-dependent helicase | DXA34_15520 | Not Available | Positive | 3315546 - 3316886 | 49248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
