Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DXA34_15335 | Not Available | Negative | 3281369 - 3283432 | 75501.9 |
| dna-deoxyinosine glycosylase | DXA34_15340 | Not Available | Positive | 3283877 - 3284377 | 18394.2 |
| hypothetical protein | DXA34_15345 | Not Available | Positive | 3284530 - 3284748 | 8052.12 |
| branched-chain amino acid transporter azld | DXA34_15350 | Not Available | Negative | 3284749 - 3285075 | 12053.3 |
| branched-chain amino acid abc transporter permease | DXA34_15355 | Not Available | Negative | 3285072 - 3285794 | 25775.1 |
| radical sam protein | DXA34_15360 | Not Available | Positive | 3285966 - 3286907 | 35547.5 |
| hypothetical protein | DXA34_15365 | Not Available | Positive | 3288297 - 3289247 | 35248.1 |
| threonine/serine exporter | DXA34_15370 | Not Available | Negative | 3289207 - 3289635 | 15218.3 |
| threonine/serine exporter | DXA34_15375 | Not Available | Negative | 3289632 - 3290402 | 27315.6 |
| ferrous iron transport protein b | DXA34_15380 | Not Available | Negative | 3290490 - 3292487 | 73726.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
