Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_01070 | Not Available | Positive | 213890 - 214507 | 22583.3 |
| lrp/asnc family transcriptional regulator | DXA34_01075 | Not Available | Positive | 214552 - 215034 | 18078.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA34_01080 | Not Available | Positive | 215031 - 216206 | 44051.4 |
| trna (cytidine(34)-2'-o)-methyltransferase | DXA34_01085 | Not Available | Positive | 216209 - 216700 | 18889.7 |
| n-acetylglucosamine-6-phosphate deacetylase | DXA34_01090 | Not Available | Positive | 216806 - 217945 | 40950.9 |
| mate family efflux transporter | DXA34_01095 | Not Available | Negative | 218031 - 219404 | 49385.9 |
| marr family transcriptional regulator | DXA34_01100 | Not Available | Negative | 219358 - 219825 | 17549.1 |
| response regulator | DXA34_01105 | Not Available | Positive | 219995 - 220717 | 26586.6 |
| hypothetical protein | DXA34_01110 | Not Available | Positive | 220680 - 221774 | 40633.3 |
| gntr family transcriptional regulator | DXA34_01115 | Not Available | Positive | 221844 - 222587 | 28659.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
