Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | DXA34_15120 | Not Available | Negative | 3235063 - 3237948 | 107882.0 |
| rod shape-determining protein mred | DXA34_15125 | Not Available | Negative | 3237941 - 3238459 | 20369.7 |
| rod shape-determining protein mrec | DXA34_15130 | Not Available | Negative | 3238440 - 3239288 | 30965.7 |
| jab domain-containing protein | DXA34_15135 | Not Available | Negative | 3239291 - 3239983 | 25811.8 |
| duf4321 domain-containing protein | DXA34_15140 | Not Available | Negative | 3240107 - 3240361 | 9256.81 |
| adp-ribosylglycohydrolase family protein | DXA34_15150 | Not Available | Negative | 3241068 - 3242057 | 35599.1 |
| extracellular solute-binding protein | DXA34_15155 | Not Available | Negative | 3242138 - 3243685 | 57173.3 |
| carbohydrate abc transporter permease | DXA34_15160 | Not Available | Negative | 3243763 - 3244647 | 32873.9 |
| sugar abc transporter permease | DXA34_15165 | Not Available | Negative | 3244650 - 3245579 | 35442.4 |
| laci family transcriptional regulator | DXA34_15170 | Not Available | Negative | 3245942 - 3246982 | 38577.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
