Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4317 family protein | DXA34_15020 | Not Available | Negative | 3217879 - 3218511 | 24357.2 |
| molecular chaperone hsp90 | DXA34_15025 | Not Available | Negative | 3218947 - 3219306 | 12543.8 |
| peptidoglycan endopeptidase | DXA34_15030 | Not Available | Negative | 3219408 - 3221264 | 67878.0 |
| cytidylate kinase-like family protein | DXA34_15035 | Not Available | Negative | 3221357 - 3222004 | 24319.2 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | DXA34_15040 | Not Available | Negative | 3222083 - 3222940 | 29386.7 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit beta | DXA34_15045 | Not Available | Negative | 3223149 - 3223805 | 22932.0 |
| rlua family pseudouridine synthase | DXA34_15050 | Not Available | Negative | 3223871 - 3224788 | 34360.6 |
| signal peptidase ii | DXA34_15055 | Not Available | Negative | 3224809 - 3225342 | 20243.1 |
| 3-dehydroquinate synthase | DXA34_15060 | Not Available | Negative | 3225335 - 3226468 | 41678.2 |
| rna-binding protein | DXA34_15065 | Not Available | Negative | 3226608 - 3227363 | 28078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
