Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DXA34_14965 | Not Available | Positive | 3207168 - 3207479 | 11840.2 |
| dctp deaminase | DXA34_14970 | Not Available | Positive | 3207778 - 3208299 | 19937.9 |
| dna-binding response regulator | DXA34_14975 | Not Available | Positive | 3208356 - 3209027 | 25875.3 |
| sensor histidine kinase | DXA34_14980 | Not Available | Positive | 3209024 - 3210217 | 44416.1 |
| abc transporter atp-binding protein | DXA34_14985 | Not Available | Positive | 3210282 - 3210968 | 25315.9 |
| abc transporter permease | DXA34_14990 | Not Available | Positive | 3210968 - 3213175 | 81544.9 |
| rna ligase rtcb family protein | DXA34_14995 | Not Available | Positive | 3213538 - 3214632 | 40417.2 |
| peptide chain release factor h | DXA34_15000 | Not Available | Positive | 3214642 - 3215235 | 22681.4 |
| integrase | DXA34_15005 | Not Available | Negative | 3215381 - 3216433 | 40679.1 |
| trna 2-thiocytidine(32) synthetase ttca | DXA34_15010 | Not Available | Negative | 3216439 - 3217179 | 27679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
