Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4869 domain-containing protein | DXA34_14760 | Not Available | Negative | 3166633 - 3167076 | 17070.4 |
| hypothetical protein | DXA34_14765 | Not Available | Negative | 3167080 - 3167793 | 27737.5 |
| recombinase family protein | DXA34_14770 | Not Available | Negative | 3168420 - 3170069 | 63638.5 |
| hypothetical protein | DXA34_14775 | Not Available | Negative | 3170005 - 3170991 | 38128.7 |
| recombinase family protein | DXA34_14780 | Not Available | Negative | 3170991 - 3172601 | 62565.0 |
| recombinase | DXA34_14785 | Not Available | Negative | 3172854 - 3173276 | 15618.6 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DXA34_14790 | Not Available | Negative | 3173355 - 3173699 | 12510.3 |
| rpn family recombination-promoting nuclease/putative transposase | DXA34_14795 | Not Available | Negative | 3174907 - 3175722 | 31678.8 |
| sigma-70 family rna polymerase sigma factor | DXA34_14800 | Not Available | Negative | 3176830 - 3177240 | 16380.8 |
| abc transporter atp-binding protein | DXA34_14810 | Not Available | Negative | 3178347 - 3180080 | 63880.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
