Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide cholinephosphotransferase | DXA34_14580 | Not Available | Positive | 3132982 - 3133845 | 33613.9 |
| glycosyltransferase | DXA34_14585 | Not Available | Positive | 3133853 - 3134839 | 37036.8 |
| d-alanyl-d-alanine carboxypeptidase | DXA34_14590 | Not Available | Positive | 3134937 - 3136382 | 52668.5 |
| lysr family transcriptional regulator | DXA34_14595 | Not Available | Negative | 3136448 - 3137431 | 37087.2 |
| rraa family protein | DXA34_14600 | Not Available | Positive | 3137943 - 3138644 | 25299.6 |
| d-2-hydroxyacid dehydrogenase | DXA34_14605 | Not Available | Positive | 3138763 - 3139719 | 34877.7 |
| slc13/dass family transporter | DXA34_14615 | Not Available | Positive | 3141092 - 3142345 | 44254.8 |
| amidohydrolase | DXA34_14620 | Not Available | Positive | 3142361 - 3143200 | 30931.5 |
| hypothetical protein | DXA34_14625 | Not Available | Positive | 3143478 - 3144038 | 20539.5 |
| phospholipase | DXA34_14630 | Not Available | Negative | 3144244 - 3145239 | 38113.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
