Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | DXA34_01020 | Not Available | Negative | 204101 - 205249 | 43230.9 |
| hypothetical protein | DXA34_01025 | Not Available | Positive | 205435 - 205887 | 16563.9 |
| hypothetical protein | DXA34_01030 | Not Available | Positive | 205950 - 206759 | 30159.3 |
| hypothetical protein | DXA34_01035 | Not Available | Negative | 206889 - 207068 | 6456.76 |
| threonylcarbamoyl-amp synthase | DXA34_01040 | Not Available | Positive | 207191 - 208255 | 38330.3 |
| cytidine deaminase | DXA34_01045 | Not Available | Positive | 208308 - 208802 | 18417.7 |
| duf4080 domain-containing protein | DXA34_01050 | Not Available | Positive | 208804 - 210636 | 71118.5 |
| endonuclease iii | DXA34_01055 | Not Available | Positive | 210662 - 211318 | 25059.3 |
| 3'-5' exonuclease | DXA34_01060 | Not Available | Positive | 211360 - 212151 | 29986.1 |
| vanomycin resistance protein vanb | DXA34_01065 | Not Available | Positive | 212325 - 213887 | 54701.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
