Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase recu | DXA34_14270 | Not Available | Positive | 3072901 - 3073437 | 20734.6 |
| prgi family protein | DXA34_14285 | Not Available | Negative | 3076055 - 3076489 | 16511.4 |
| hypothetical protein | DXA34_14290 | Not Available | Negative | 3076507 - 3077373 | 31560.3 |
| conjugal transfer protein | DXA34_14295 | Not Available | Negative | 3077399 - 3077614 | 7077.82 |
| xre family transcriptional regulator | DXA34_14300 | Not Available | Negative | 3077698 - 3078090 | 15064.3 |
| hypothetical protein | DXA34_14305 | Not Available | Negative | 3078096 - 3078416 | 12266.7 |
| type iv secretory system conjugative dna transfer family protein | DXA34_14310 | Not Available | Negative | 3078429 - 3080180 | 65662.3 |
| pcfb family protein | DXA34_14315 | Not Available | Negative | 3080180 - 3080662 | 18249.3 |
| hypothetical protein | DXA34_14320 | Not Available | Negative | 3080699 - 3081010 | 11892.1 |
| duf3846 domain-containing protein | DXA34_14325 | Not Available | Negative | 3081021 - 3081662 | 23950.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
