Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vacuolar family h+-atpase subunit h | DXA34_14220 | Not Available | Positive | 3063056 - 3063649 | 22079.8 |
| nucleoside recognition protein | DXA34_14225 | Not Available | Negative | 3063627 - 3064544 | 32682.3 |
| m23 family peptidase | DXA34_14230 | Not Available | Positive | 3064597 - 3065400 | 30803.5 |
| sam-dependent methyltransferase | DXA34_14235 | Not Available | Positive | 3065521 - 3066927 | 53290.7 |
| pseudouridine synthase | DXA34_14240 | Not Available | Positive | 3066927 - 3067661 | 26814.8 |
| had family phosphatase | DXA34_14245 | Not Available | Positive | 3067748 - 3068434 | 25823.1 |
| ygiq family radical sam protein | DXA34_14250 | Not Available | Positive | 3068449 - 3070404 | 74059.6 |
| sdr family nad(p)-dependent oxidoreductase | DXA34_14255 | Not Available | Positive | 3070411 - 3071220 | 29406.2 |
| o-linked glcnac transferase-like protein | DXA34_14260 | Not Available | Positive | 3071256 - 3071825 | 21500.5 |
| rlua family pseudouridine synthase | DXA34_14265 | Not Available | Positive | 3071858 - 3072859 | 37728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
