Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | DXA34_14170 | Not Available | Positive | 3057398 - 3057745 | 13036.9 |
| signal peptidase i | DXA34_14175 | Not Available | Positive | 3057827 - 3058375 | 20770.3 |
| ribosome biogenesis gtpase ylqf | DXA34_14180 | Not Available | Positive | 3058388 - 3059242 | 32266.2 |
| ribonuclease hii | DXA34_14185 | Not Available | Positive | 3059301 - 3059960 | 24773.0 |
| yran family protein | DXA34_14190 | Not Available | Positive | 3059947 - 3060315 | 13866.5 |
| peptidoglycan editing factor pgef | DXA34_14195 | Not Available | Positive | 3060341 - 3061198 | 32159.4 |
| small acid-soluble spore protein | DXA34_14200 | Not Available | Positive | 3061390 - 3061596 | 7381.77 |
| hypothetical protein | DXA34_14205 | Not Available | Positive | 3061811 - 3062032 | 8602.63 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DXA34_14210 | Not Available | Positive | 3061977 - 3062537 | 21054.6 |
| pantetheine-phosphate adenylyltransferase | DXA34_14215 | Not Available | Positive | 3062540 - 3063040 | 18536.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
