Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | DXA34_14070 | Not Available | Positive | 3037279 - 3038310 | 38272.7 |
| abc transporter permease | DXA34_14075 | Not Available | Positive | 3038307 - 3038984 | 24183.7 |
| metq/nlpa family abc transporter substrate-binding protein | DXA34_14080 | Not Available | Positive | 3039074 - 3040000 | 32878.4 |
| amidohydrolase | DXA34_14085 | Not Available | Positive | 3040071 - 3041246 | 42866.8 |
| hypothetical protein | DXA34_14090 | Not Available | Positive | 3041812 - 3042801 | 38461.1 |
| carbohydrate kinase family protein | DXA34_14095 | Not Available | Negative | 3042854 - 3043777 | 33493.3 |
| amidohydrolase | DXA34_14100 | Not Available | Positive | 3044000 - 3045436 | 51840.6 |
| peroxiredoxin | DXA34_14105 | Not Available | Positive | 3045537 - 3045989 | 16982.5 |
| mate family efflux transporter | DXA34_14110 | Not Available | Positive | 3046111 - 3047469 | 48990.6 |
| transcriptional regulator | DXA34_14115 | Not Available | Negative | 3047557 - 3047784 | 8262.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
