Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_00970 | Not Available | Positive | 195589 - 195864 | 10523.4 |
| sensor histidine kinase | DXA34_00975 | Not Available | Negative | 195872 - 197023 | 42756.6 |
| dna-binding response regulator | DXA34_00980 | Not Available | Negative | 197020 - 197697 | 25341.4 |
| 4fe-4s binding protein | DXA34_00985 | Not Available | Positive | 198022 - 198930 | 32930.2 |
| is110 family transposase | DXA34_00990 | Not Available | Negative | 199029 - 200249 | 46114.9 |
| tlpa family protein disulfide reductase | DXA34_00995 | Not Available | Positive | 200554 - 201504 | 33861.1 |
| peptide-methionine (r)-s-oxide reductase | DXA34_01000 | Not Available | Positive | 201545 - 202648 | 41604.8 |
| hypothetical protein | DXA34_01005 | Not Available | Negative | 202728 - 202946 | 8207.71 |
| hypothetical protein | DXA34_01010 | Not Available | Positive | 203167 - 203652 | 18086.3 |
| hypothetical protein | DXA34_01015 | Not Available | Positive | 203730 - 204029 | 10963.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
