Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome segregation protein smc | DXA34_14015 | Not Available | Negative | 3019422 - 3022793 | 131590.0 |
| duf4194 domain-containing protein | DXA34_14020 | Not Available | Negative | 3022771 - 3023460 | 26689.8 |
| hypothetical protein | DXA34_14025 | Not Available | Negative | 3023457 - 3024875 | 55822.3 |
| response regulator | DXA34_14030 | Not Available | Negative | 3024920 - 3028243 | 126061.0 |
| padr family transcriptional regulator | DXA34_14035 | Not Available | Positive | 3028476 - 3029027 | 21269.4 |
| nad(p)h dehydrogenase | DXA34_14040 | Not Available | Positive | 3029024 - 3030658 | 61925.3 |
| rubrerythrin family protein | DXA34_14045 | Not Available | Positive | 3030899 - 3031432 | 20191.7 |
| beta-aspartyl-peptidase | DXA34_14050 | Not Available | Positive | 3031781 - 3032965 | 42011.5 |
| putative basic amino acid antiporter yfcc | DXA34_14055 | Not Available | Positive | 3032983 - 3034494 | 54275.3 |
| replication-associated recombination protein a | DXA34_14060 | Not Available | Negative | 3034523 - 3035857 | 49450.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
