[Clostridium] symbiosum strain OF01-1AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Otoolea

Description

Clostridium symbiosum strain OF01-1AC is a gram-negative bacterium primarily found in the gut of its host, Homo sapiens. This strain is notable for possessing a single replicon, which is characteristic of its genetic organization. The presence of Clostridium symbiosum in the human gut suggests it may play a role in the complex microbial ecosystem of the gastrointestinal tract. While the specific functions of this strain within its habitat remain unspecified, members of the Clostridium genus are often associated with various metabolic processes, including fermentation and the production of short-chain fatty acids, which can contribute to gut health and overall metabolic function. The unique traits of Clostridium symbiosum strain OF01-1AC, including its gram-negative classification and singular replicon, may offer insights into its adaptability and potential interactions within the gut microbiome. Understanding the ecological niche of this strain could further illuminate its contributions to human health, particularly in relation to its symbiotic relationships with the host and other gut microorganisms. The study of this strain could provide valuable information regarding the dynamics of gut microbiota and their implications for human physiology. The genomic data is accessible via accession QSDB00000000.1, which may facilitate further research into its characteristics and functional capabilities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusOtoolea
Species[Clostridium] symbiosum
Strainstrain OF01-1AC

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] symbiosum strain OF01-1AC OF01-1AC.Scaf189, whole

Gene Summary

Adenine Count

1326900 bp

Thymine Count

1321925 bp

Guanine Count

1221078 bp

Cytosine Count

1204664 bp

Genome Length

5075475 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxynorspermidine decarboxylaseDXA34_13950Not AvailableNegative3007276 - 300842742874.3
saccharopine dehydrogenase family proteinDXA34_13955Not AvailableNegative3008471 - 300967345032.9
agmatinaseDXA34_13960Not AvailableNegative3009776 - 301065732119.1
polyamine aminopropyltransferaseDXA34_13965Not AvailableNegative3010638 - 301149833334.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDXA34_13975Not AvailableNegative3012326 - 301377752787.7
adenosylmethionine decarboxylaseDXA34_13980Not AvailableNegative3013795 - 301455629157.9
chromate transporterDXA34_13995Not AvailableNegative3016271 - 301683120011.5
chromate transporterDXA34_14000Not AvailableNegative3016828 - 301739420341.7
lysr family transcriptional regulatorDXA34_14005Not AvailablePositive3017576 - 301846033131.5
prolipoprotein diacylglyceryl transferaseDXA34_14010Not AvailableNegative3018494 - 301927327929.5

Displaying genes 2671 – 2680 of 4517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.