Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine decarboxylase | DXA34_13950 | Not Available | Negative | 3007276 - 3008427 | 42874.3 |
| saccharopine dehydrogenase family protein | DXA34_13955 | Not Available | Negative | 3008471 - 3009673 | 45032.9 |
| agmatinase | DXA34_13960 | Not Available | Negative | 3009776 - 3010657 | 32119.1 |
| polyamine aminopropyltransferase | DXA34_13965 | Not Available | Negative | 3010638 - 3011498 | 33334.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA34_13975 | Not Available | Negative | 3012326 - 3013777 | 52787.7 |
| adenosylmethionine decarboxylase | DXA34_13980 | Not Available | Negative | 3013795 - 3014556 | 29157.9 |
| chromate transporter | DXA34_13995 | Not Available | Negative | 3016271 - 3016831 | 20011.5 |
| chromate transporter | DXA34_14000 | Not Available | Negative | 3016828 - 3017394 | 20341.7 |
| lysr family transcriptional regulator | DXA34_14005 | Not Available | Positive | 3017576 - 3018460 | 33131.5 |
| prolipoprotein diacylglyceryl transferase | DXA34_14010 | Not Available | Negative | 3018494 - 3019273 | 27929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
