Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_13850 | Not Available | Negative | 2986833 - 2987831 | 37504.4 |
| sodium/glutamate symporter | DXA34_13855 | Not Available | Positive | 2988155 - 2989369 | 42775.7 |
| nitrite/sulfite reductase | DXA34_13860 | Not Available | Negative | 2989423 - 2990976 | 56999.5 |
| hypothetical protein | DXA34_13865 | Not Available | Negative | 2991067 - 2991336 | 10092.2 |
| hypothetical protein | DXA34_13870 | Not Available | Negative | 2991337 - 2991594 | 8804.21 |
| duf2500 domain-containing protein | DXA34_13875 | Not Available | Negative | 2991614 - 2992003 | 14511.3 |
| 3-isopropylmalate dehydratase small subunit | DXA34_13880 | Not Available | Negative | 2992188 - 2992673 | 17554.1 |
| 3-isopropylmalate dehydratase large subunit | DXA34_13885 | Not Available | Negative | 2992738 - 2994003 | 45278.7 |
| lysr family transcriptional regulator | DXA34_13890 | Not Available | Positive | 2994176 - 2995063 | 33151.3 |
| hypothetical protein | DXA34_13895 | Not Available | Negative | 2995122 - 2995352 | 8917.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
