Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine permease | DXA34_13790 | Not Available | Negative | 2974625 - 2976022 | 51245.7 |
| dihydropyrimidinase | DXA34_13795 | Not Available | Negative | 2976060 - 2977484 | 52102.3 |
| ygey family selenium metabolism-linked hydrolase | DXA34_13800 | Not Available | Negative | 2977536 - 2978717 | 43415.8 |
| diaminopropionate ammonia-lyase | DXA34_13805 | Not Available | Negative | 2978747 - 2979946 | 44081.4 |
| hypothetical protein | DXA34_13810 | Not Available | Negative | 2980239 - 2980481 | 9576.6 |
| n-acetyltransferase | DXA34_13815 | Not Available | Negative | 2980517 - 2981011 | 18865.4 |
| aaa family atpase | DXA34_13820 | Not Available | Negative | 2980989 - 2982767 | 66953.1 |
| hypothetical protein | DXA34_13825 | Not Available | Negative | 2983194 - 2983730 | 20351.2 |
| hypothetical protein | DXA34_13830 | Not Available | Negative | 2983705 - 2984550 | 32932.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DXA34_13835 | Not Available | Positive | 2985163 - 2986230 | 38873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
