Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03905 family tscpd domain-containing protein | DXA34_13740 | Not Available | Positive | 2964093 - 2964347 | 9212.04 |
| flavin reductase | DXA34_13745 | Not Available | Positive | 2964612 - 2965232 | 22898.1 |
| lysr family transcriptional regulator | DXA34_13750 | Not Available | Negative | 2965288 - 2966184 | 34420.7 |
| amidohydrolase | DXA34_13755 | Not Available | Positive | 2966344 - 2967537 | 43386.9 |
| duf3604 domain-containing protein | DXA34_13760 | Not Available | Positive | 2967522 - 2969507 | 74319.4 |
| na+/h+ antiporter nhac | DXA34_13765 | Not Available | Positive | 2969556 - 2971010 | 51894.7 |
| yafy family transcriptional regulator | DXA34_13770 | Not Available | Negative | 2971073 - 2972011 | 36575.1 |
| pyridoxamine 5'-phosphate oxidase family protein | DXA34_13775 | Not Available | Positive | 2972104 - 2972520 | 15897.2 |
| rida family protein | DXA34_13780 | Not Available | Negative | 2972608 - 2972985 | 13236.0 |
| d-aminoacylase | DXA34_13785 | Not Available | Negative | 2972986 - 2974590 | 59512.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
