Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA34_13690 | Not Available | Negative | 2951109 - 2952026 | 34014.8 |
| peptide abc transporter substrate-binding protein | DXA34_13695 | Not Available | Negative | 2952131 - 2953873 | 63706.4 |
| hypothetical protein | DXA34_13700 | Not Available | Negative | 2954247 - 2954513 | 10570.5 |
| dicarboxylate/amino acid:cation symporter | DXA34_13705 | Not Available | Negative | 2954556 - 2955803 | 44134.3 |
| pyridoxal phosphate-dependent aminotransferase | DXA34_13710 | Not Available | Negative | 2955874 - 2957055 | 45020.7 |
| hd domain-containing protein | DXA34_13715 | Not Available | Positive | 2957249 - 2958610 | 51506.1 |
| glucose-6-phosphate isomerase | DXA34_13720 | Not Available | Negative | 2958716 - 2960065 | 50000.3 |
| nadp-specific glutamate dehydrogenase | DXA34_13725 | Not Available | Positive | 2960341 - 2961675 | 49009.7 |
| hypothetical protein | DXA34_13730 | Not Available | Negative | 2961857 - 2962879 | 38862.4 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DXA34_13735 | Not Available | Negative | 2963045 - 2963737 | 24870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
