Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | DXA34_13485 | Not Available | Positive | 2903319 - 2903747 | 15599.1 |
| duf2156 domain-containing protein | DXA34_13490 | Not Available | Positive | 2903967 - 2905745 | 67221.8 |
| yccf domain-containing protein | DXA34_13495 | Not Available | Positive | 2905863 - 2906222 | 12628.2 |
| Trna-arg | Not Available | Not Available | Positive | 2906438 - 2906509 | Not Available |
| hypothetical protein | DXA34_13505 | Not Available | Positive | 2907191 - 2908120 | 35132.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DXA34_13510 | Not Available | Positive | 2908158 - 2909201 | 39085.1 |
| nucleotidyltransferase | DXA34_13515 | Not Available | Positive | 2909274 - 2910293 | 39913.5 |
| nucleotidyltransferase domain-containing protein | DXA34_13520 | Not Available | Positive | 2910283 - 2911098 | 31692.5 |
| pseudouridine synthase | DXA34_13525 | Not Available | Positive | 2911091 - 2911816 | 27508.5 |
| nad-dependent dna ligase liga | DXA34_13530 | Not Available | Positive | 2911849 - 2913840 | 73789.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
