Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | DXA34_13435 | Not Available | Positive | 2894832 - 2895941 | 40150.1 |
| trap transporter small permease | DXA34_13440 | Not Available | Positive | 2896053 - 2896577 | 20160.2 |
| trap transporter large permease | DXA34_13445 | Not Available | Positive | 2896607 - 2897875 | 45053.6 |
| hypothetical protein | DXA34_13450 | Not Available | Positive | 2897900 - 2898382 | 18380.0 |
| hypothetical protein | DXA34_13455 | Not Available | Positive | 2898395 - 2898877 | 18263.8 |
| serine dehydratase subunit alpha family protein | DXA34_13460 | Not Available | Positive | 2898902 - 2900203 | 46670.5 |
| dihydroxyacetone kinase subunit dhak | DXA34_13465 | Not Available | Positive | 2900187 - 2901176 | 34672.3 |
| dihydroxyacetone kinase subunit l | DXA34_13470 | Not Available | Positive | 2901194 - 2901829 | 22735.4 |
| deda family protein | DXA34_13475 | Not Available | Positive | 2901936 - 2902553 | 22345.7 |
| hypothetical protein | DXA34_13480 | Not Available | Positive | 2902685 - 2902972 | 10507.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
