Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_13385 | Not Available | Positive | 2882428 - 2882931 | 18784.1 |
| imp dehydrogenase | DXA34_13390 | Not Available | Positive | 2883189 - 2884640 | 52213.4 |
| yitt family protein | DXA34_13395 | Not Available | Positive | 2884832 - 2885701 | 30857.6 |
| peptidoglycan endopeptidase | DXA34_13400 | Not Available | Positive | 2885935 - 2886648 | 25679.6 |
| dna-binding response regulator | DXA34_13405 | Not Available | Positive | 2886751 - 2887452 | 26109.6 |
| sensor histidine kinase | DXA34_13410 | Not Available | Positive | 2887449 - 2888849 | 52387.5 |
| hypothetical protein | DXA34_13415 | Not Available | Positive | 2888939 - 2890300 | 52096.3 |
| yfcc family protein | DXA34_13420 | Not Available | Negative | 2890457 - 2891866 | 50059.7 |
| m20 family peptidase | DXA34_13425 | Not Available | Negative | 2891897 - 2893078 | 43246.6 |
| fadr family transcriptional regulator | DXA34_13430 | Not Available | Positive | 2893912 - 2894622 | 27164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
