Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DXA34_13330 | Not Available | Positive | 2870755 - 2871957 | 45956.4 |
| deor/glpr transcriptional regulator | DXA34_13335 | Not Available | Positive | 2872382 - 2873161 | 28549.4 |
| sgcq protein | DXA34_13340 | Not Available | Positive | 2873177 - 2873989 | 29938.1 |
| sis domain-containing protein | DXA34_13345 | Not Available | Positive | 2873991 - 2874599 | 21396.8 |
| glucosamine-6-phosphate deaminase | DXA34_13350 | Not Available | Positive | 2874604 - 2875329 | 26345.8 |
| ribulokinase | DXA34_13355 | Not Available | Positive | 2875369 - 2877042 | 61620.3 |
| autoinducer 2 abc transporter substrate-binding protein | DXA34_13360 | Not Available | Positive | 2877061 - 2878149 | 38822.8 |
| sugar abc transporter atp-binding protein | DXA34_13365 | Not Available | Positive | 2878340 - 2879854 | 56820.0 |
| abc transporter permease | DXA34_13370 | Not Available | Positive | 2879851 - 2880894 | 36433.9 |
| abc transporter permease | DXA34_13375 | Not Available | Positive | 2880887 - 2881969 | 37615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
