Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpr family phosphocarrier protein | DXA34_13170 | Not Available | Positive | 2841554 - 2841817 | 9171.24 |
| acyl-coa thioesterase | DXA34_13175 | Not Available | Positive | 2841945 - 2842379 | 17011.3 |
| phosphatase pap2 family protein | DXA34_13180 | Not Available | Positive | 2842383 - 2842922 | 20224.3 |
| folate family ecf transporter s component | DXA34_13185 | Not Available | Positive | 2843094 - 2843669 | 21329.2 |
| atp-binding protein | DXA34_13190 | Not Available | Positive | 2844161 - 2844994 | 29928.4 |
| d-amino acid aminotransferase | DXA34_13195 | Not Available | Negative | 2845135 - 2845977 | 31715.5 |
| sensor histidine kinase | DXA34_13200 | Not Available | Negative | 2846347 - 2847699 | 50211.8 |
| hypothetical protein | DXA34_13205 | Not Available | Positive | 2847794 - 2848039 | 8877.83 |
| dna-binding response regulator | DXA34_13210 | Not Available | Negative | 2848036 - 2848713 | 25665.9 |
| extracellular solute-binding protein | DXA34_13215 | Not Available | Positive | 2848905 - 2851208 | 83953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
