Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation transcriptional regulator spoiiid | DXA34_12960 | Not Available | Positive | 2797471 - 2797740 | 10173.2 |
| protease complex subunit prcb family protein | DXA34_12965 | Not Available | Positive | 2797966 - 2798394 | 15708.0 |
| n-acetyltransferase | DXA34_12970 | Not Available | Negative | 2798539 - 2798811 | 10189.1 |
| sirohydrochlorin cobaltochelatase | DXA34_12975 | Not Available | Positive | 2799472 - 2800506 | 37122.9 |
| hypothetical protein | DXA34_12980 | Not Available | Positive | 2800606 - 2801622 | 36385.9 |
| abc transporter substrate-binding protein | DXA34_12985 | Not Available | Positive | 2801622 - 2802845 | 44402.9 |
| iron abc transporter permease | DXA34_12995 | Not Available | Positive | 2803307 - 2804326 | 36173.9 |
| abc transporter atp-binding protein | DXA34_13000 | Not Available | Positive | 2804338 - 2805441 | 40899.0 |
| hypothetical protein | DXA34_13005 | Not Available | Positive | 2805776 - 2806213 | 16290.1 |
| atp-binding protein | DXA34_13010 | Not Available | Positive | 2806219 - 2808381 | 82497.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
