Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0261 family protein | DXA34_12910 | Not Available | Positive | 2786475 - 2787692 | 44295.8 |
| class ii aldolase/adducin family protein | DXA34_12915 | Not Available | Positive | 2787858 - 2788451 | 21518.5 |
| gntr family transcriptional regulator | DXA34_12920 | Not Available | Negative | 2788538 - 2789197 | 24786.8 |
| c4-dicarboxylate abc transporter substrate-binding protein | DXA34_12925 | Not Available | Positive | 2789506 - 2790627 | 41041.0 |
| trap transporter small permease | DXA34_12930 | Not Available | Positive | 2790672 - 2791208 | 19527.6 |
| trap transporter large permease | DXA34_12935 | Not Available | Positive | 2791205 - 2792533 | 47583.3 |
| cysteine hydrolase | DXA34_12940 | Not Available | Positive | 2792611 - 2793255 | 24174.8 |
| sensor histidine kinase | DXA34_12945 | Not Available | Negative | 2793288 - 2794613 | 51113.5 |
| dna-binding response regulator | DXA34_12950 | Not Available | Negative | 2794606 - 2795313 | 27107.3 |
| glucan-binding protein | DXA34_12955 | Not Available | Positive | 2795608 - 2797293 | 64168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
