Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DXA34_12855 | Not Available | Positive | 2774254 - 2775705 | 53602.8 |
| trigger factor | DXA34_12860 | Not Available | Positive | 2775827 - 2776945 | 40747.4 |
| xanthine phosphoribosyltransferase | DXA34_12865 | Not Available | Positive | 2776998 - 2777579 | 21285.8 |
| had family phosphatase | DXA34_12870 | Not Available | Positive | 2777572 - 2778375 | 29780.6 |
| hypothetical protein | DXA34_12875 | Not Available | Positive | 2778379 - 2779026 | 25112.6 |
| dna helicase recq | DXA34_12880 | Not Available | Positive | 2779096 - 2780952 | 70773.0 |
| orotate phosphoribosyltransferase | DXA34_12890 | Not Available | Positive | 2781904 - 2782545 | 23889.0 |
| sodium:solute symporter family protein | DXA34_12895 | Not Available | Negative | 2782623 - 2784065 | 50259.3 |
| nickel-dependent lactate racemase | DXA34_12900 | Not Available | Negative | 2784100 - 2785401 | 47764.5 |
| n-acyl homoserine lactonase family protein | DXA34_12905 | Not Available | Positive | 2785627 - 2786445 | 31058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
