Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase | DXA34_12805 | Not Available | Positive | 2762177 - 2763529 | 49298.8 |
| phosphoglycerate dehydrogenase | DXA34_12810 | Not Available | Positive | 2763749 - 2764696 | 34341.5 |
| trap transporter substrate-binding protein | DXA34_12815 | Not Available | Positive | 2765042 - 2766121 | 36629.6 |
| trap transporter permease dctm/q | DXA34_12820 | Not Available | Positive | 2766243 - 2768192 | 69032.3 |
| hypothetical protein | DXA34_12825 | Not Available | Positive | 2768428 - 2768946 | 18218.6 |
| phosphatase | DXA34_12830 | Not Available | Negative | 2768989 - 2769717 | 26747.0 |
| s1 rna-binding domain-containing protein | DXA34_12835 | Not Available | Positive | 2769850 - 2770863 | 37273.2 |
| gtp pyrophosphokinase family protein | DXA34_12840 | Not Available | Positive | 2771058 - 2771723 | 25545.9 |
| hypothetical protein | DXA34_12845 | Not Available | Positive | 2771771 - 2773588 | 68115.9 |
| d-tyrosyl-trna(tyr) deacylase | DXA34_12850 | Not Available | Positive | 2773608 - 2774072 | 17151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
