Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_12750 | Not Available | Positive | 2747496 - 2747909 | 15564.7 |
| is200/is605 family transposase | DXA34_12755 | Not Available | Negative | 2748133 - 2748588 | 17955.0 |
| hypothetical protein | DXA34_12760 | Not Available | Negative | 2748771 - 2748951 | 6800.26 |
| cytidyltransferase-related domain protein | DXA34_12765 | Not Available | Positive | 2748975 - 2753828 | 186308.0 |
| lactate dehydrogenase | DXA34_12770 | Not Available | Positive | 2753857 - 2755107 | 46415.5 |
| nadph-dependent oxidoreductase | DXA34_12775 | Not Available | Positive | 2755204 - 2756298 | 39949.2 |
| phospholipase d family protein | DXA34_12780 | Not Available | Positive | 2756295 - 2757737 | 54933.0 |
| sensor histidine kinase | DXA34_12790 | Not Available | Positive | 2758347 - 2759648 | 50252.0 |
| response regulator | DXA34_12795 | Not Available | Positive | 2759650 - 2760495 | 31490.4 |
| sodium/glutamate symporter | DXA34_12800 | Not Available | Positive | 2760679 - 2761866 | 41737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
