Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | DXA34_12535 | Not Available | Negative | 2705805 - 2706917 | 40328.4 |
| alanine dehydrogenase | DXA34_12540 | Not Available | Negative | 2706966 - 2708129 | 42024.1 |
| gnat family n-acetyltransferase | DXA34_12545 | Not Available | Positive | 2708447 - 2708929 | 18825.7 |
| succinylglutamate desuccinylase | DXA34_12550 | Not Available | Negative | 2709061 - 2710203 | 41807.4 |
| trap transporter large permease | DXA34_12555 | Not Available | Negative | 2710378 - 2711646 | 44822.0 |
| hypothetical protein | DXA34_12560 | Not Available | Negative | 2711720 - 2712373 | 21824.0 |
| gamma-glutamyltransferase | DXA34_12565 | Not Available | Negative | 2712461 - 2714299 | 65046.1 |
| hypothetical protein | DXA34_12570 | Not Available | Positive | 2714383 - 2714562 | 6417.79 |
| poly-gamma-glutamate synthase pgsb | DXA34_12580 | Not Available | Positive | 2715342 - 2716442 | 41281.5 |
| poly-gamma-glutamate biosynthesis protein pgsc | DXA34_12585 | Not Available | Positive | 2716426 - 2716842 | 15365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
