Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit/fixa family protein | DXA34_12485 | Not Available | Positive | 2692844 - 2693641 | 28622.8 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DXA34_12490 | Not Available | Positive | 2693638 - 2694693 | 37880.5 |
| tetratricopeptide repeat protein | DXA34_12495 | Not Available | Positive | 2694726 - 2697563 | 111081.0 |
| n-acetylmuramoyl-l-alanine amidase | DXA34_12500 | Not Available | Positive | 2697916 - 2698626 | 26445.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DXA34_12505 | Not Available | Negative | 2698746 - 2700092 | 50435.1 |
| dethiobiotin synthase | DXA34_12510 | Not Available | Negative | 2700104 - 2700859 | 27209.6 |
| biotin transporter bioy | DXA34_12515 | Not Available | Negative | 2700882 - 2701478 | 21108.7 |
| yitt family protein | DXA34_12520 | Not Available | Negative | 2701771 - 2702643 | 31173.7 |
| transcriptional regulator | DXA34_12525 | Not Available | Negative | 2702687 - 2704096 | 52539.5 |
| sodium:glutamate symporter | DXA34_12530 | Not Available | Negative | 2704371 - 2705735 | 49470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
