Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA34_00775 | Not Available | Positive | 159759 - 160661 | 32346.2 |
| duf4406 domain-containing protein | DXA34_00780 | Not Available | Positive | 160684 - 161085 | 14816.0 |
| hypothetical protein | DXA34_00785 | Not Available | Positive | 161108 - 161620 | 19422.3 |
| hypothetical protein | DXA34_00790 | Not Available | Positive | 161631 - 161891 | 10076.5 |
| hypothetical protein | DXA34_00795 | Not Available | Positive | 161888 - 162490 | 23661.3 |
| fic family protein | DXA34_00800 | Not Available | Positive | 162631 - 163395 | 29156.9 |
| duf87 domain-containing protein | DXA34_00805 | Not Available | Positive | 163480 - 165309 | 69612.3 |
| virulence associated protein | DXA34_00810 | Not Available | Positive | 165326 - 166387 | 40643.5 |
| gamma-glutamylcyclotransferase | DXA34_00815 | Not Available | Positive | 166401 - 166916 | 19701.5 |
| xre family transcriptional regulator | DXA34_00820 | Not Available | Negative | 166955 - 167329 | 13878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
