Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | DXA34_12430 | Not Available | Positive | 2680431 - 2681399 | 34873.7 |
| rida family protein | DXA34_12435 | Not Available | Positive | 2681396 - 2681770 | 13413.1 |
| murr/rpir family transcriptional regulator | DXA34_12440 | Not Available | Positive | 2681811 - 2682659 | 31051.4 |
| hypothetical protein | DXA34_12445 | Not Available | Negative | 2682816 - 2683238 | 14727.1 |
| pyridoxamine kinase | DXA34_12450 | Not Available | Negative | 2683307 - 2684152 | 30649.7 |
| hypothetical protein | DXA34_12455 | Not Available | Positive | 2684564 - 2685922 | 48429.3 |
| urocanate hydratase | DXA34_12460 | Not Available | Positive | 2685969 - 2687969 | 74943.4 |
| coa transferase | DXA34_12465 | Not Available | Positive | 2687989 - 2689242 | 46714.5 |
| 2-hydroxyacyl-coa dehydratase | DXA34_12470 | Not Available | Positive | 2689263 - 2690498 | 47678.9 |
| 2-hydroxyacyl-coa dehydratase | DXA34_12475 | Not Available | Positive | 2690500 - 2691642 | 42792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
