Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf541 domain-containing protein | DXA34_12330 | Not Available | Positive | 2659904 - 2660647 | 26218.7 |
| dmt family transporter | DXA34_12335 | Not Available | Positive | 2660742 - 2661170 | 15315.3 |
| competence protein cela | DXA34_12340 | Not Available | Positive | 2661275 - 2661967 | 24403.9 |
| dna-binding response regulator | DXA34_12345 | Not Available | Positive | 2661990 - 2662688 | 26406.0 |
| gnat family n-acetyltransferase | DXA34_12350 | Not Available | Positive | 2662739 - 2663317 | 21659.9 |
| mfs transporter | DXA34_12355 | Not Available | Positive | 2663339 - 2665459 | 80947.2 |
| alpha/beta hydrolase | DXA34_12360 | Not Available | Positive | 2665568 - 2666593 | 38385.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DXA34_12365 | Not Available | Positive | 2666595 - 2667074 | 18146.2 |
| eal domain-containing protein | DXA34_12370 | Not Available | Negative | 2667195 - 2669288 | 78374.9 |
| dna repair protein mmcb-related protein | DXA34_12375 | Not Available | Positive | 2669564 - 2670211 | 26030.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
