Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna1(val) (adenine(37)-n6)-methyltransferase | DXA34_12120 | Not Available | Positive | 2625436 - 2626173 | 27638.7 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DXA34_12125 | Not Available | Positive | 2626261 - 2627109 | 31888.4 |
| hypothetical protein | DXA34_12130 | Not Available | Positive | 2627125 - 2627745 | 23163.8 |
| 1,4-alpha-glucan branching protein glgb | DXA34_12135 | Not Available | Negative | 2627871 - 2629823 | 74552.0 |
| alpha-amylase | DXA34_12140 | Not Available | Negative | 2629828 - 2631174 | 51745.0 |
| duf2508 family protein | DXA34_12145 | Not Available | Negative | 2631213 - 2631458 | 9578.67 |
| arsr family transcriptional regulator | DXA34_12150 | Not Available | Negative | 2631594 - 2631992 | 14727.4 |
| hypothetical protein | DXA34_12155 | Not Available | Positive | 2632436 - 2632978 | 20122.3 |
| hypothetical protein | DXA34_12160 | Not Available | Positive | 2632975 - 2633982 | 37429.1 |
| cpaf family protein | DXA34_12165 | Not Available | Positive | 2634063 - 2635217 | 43219.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
