Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | DXA34_12020 | Not Available | Positive | 2605236 - 2605634 | 14645.2 |
| hypothetical protein | DXA34_12025 | Not Available | Positive | 2605698 - 2606381 | 24442.6 |
| hypothetical protein | DXA34_12030 | Not Available | Positive | 2606395 - 2606766 | 15504.9 |
| hypothetical protein | DXA34_12035 | Not Available | Positive | 2606806 - 2607177 | 15232.7 |
| abc transporter substrate-binding protein | DXA34_12040 | Not Available | Positive | 2607196 - 2608758 | 57102.2 |
| abc transporter permease | DXA34_12045 | Not Available | Positive | 2608870 - 2609799 | 33710.5 |
| abc transporter permease | DXA34_12050 | Not Available | Positive | 2609811 - 2610692 | 31620.0 |
| abc transporter atp-binding protein | DXA34_12055 | Not Available | Positive | 2610726 - 2611781 | 38608.7 |
| abc transporter atp-binding protein | DXA34_12060 | Not Available | Positive | 2611781 - 2612728 | 35128.0 |
| m20/m25/m40 family metallo-hydrolase | DXA34_12065 | Not Available | Positive | 2612808 - 2614235 | 51650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
