Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | DXA34_11860 | Not Available | Negative | 2577723 - 2578865 | 42217.7 |
| lysr family transcriptional regulator | DXA34_11870 | Not Available | Positive | 2580499 - 2581401 | 34340.7 |
| dna-binding response regulator | DXA34_11875 | Not Available | Positive | 2581422 - 2582132 | 27211.0 |
| sensor histidine kinase | DXA34_11880 | Not Available | Positive | 2582132 - 2583445 | 49584.6 |
| crp/fnr family transcriptional regulator | DXA34_11885 | Not Available | Positive | 2583513 - 2584196 | 26358.9 |
| rubredoxin | DXA34_11890 | Not Available | Negative | 2584201 - 2584362 | 5852.8 |
| desulfoferrodoxin | DXA34_11895 | Not Available | Negative | 2584403 - 2584768 | 13212.6 |
| biotin transporter bioy | DXA34_11900 | Not Available | Positive | 2584983 - 2585552 | 20357.9 |
| hypothetical protein | DXA34_11905 | Not Available | Positive | 2585676 - 2587073 | 50558.3 |
| hypothetical protein | DXA34_11910 | Not Available | Negative | 2587424 - 2587657 | 8801.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
