Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | strain OF01-1AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1326900 bp
Thymine Count
1321925 bp
Guanine Count
1221078 bp
Cytosine Count
1204664 bp
Genome Length
5075475 bp
Protein-coding Genes
4399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DXA34_11640 | Not Available | Positive | 2535286 - 2535876 | 22562.3 |
| hypothetical protein | DXA34_11645 | Not Available | Positive | 2535873 - 2537327 | 52074.8 |
| Trna-gln | Not Available | Not Available | Positive | 2537459 - 2537531 | Not Available |
| hypothetical protein | DXA34_11655 | Not Available | Negative | 2537671 - 2537811 | 4684.55 |
| type iv secretory system conjugative dna transfer family protein | DXA34_11660 | Not Available | Negative | 2537902 - 2539689 | 67082.8 |
| pcfb family protein | DXA34_11665 | Not Available | Negative | 2539686 - 2540168 | 18062.9 |
| hypothetical protein | DXA34_11670 | Not Available | Negative | 2540268 - 2540618 | 12931.5 |
| replication initiator a domain-containing protein | DXA34_11675 | Not Available | Negative | 2540795 - 2541700 | 34747.4 |
| mate family efflux transporter | DXA34_11685 | Not Available | Negative | 2542209 - 2543537 | 47410.5 |
| hypothetical protein | DXA34_11690 | Not Available | Negative | 2543626 - 2543913 | 10693.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
